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Behrouz Harighi

Behrouz Harighi

Academic rank: Professor
ORCID:
Education: PhD.
ScopusId: 17433917500
HIndex:
Faculty: Faculty of Agriculture
Address: Plant Protection Department, Faculty of Agriculture, University of Kurdistan, Sanandaj, Iran
Phone: 08733620552 داخلی 3334

Research

Title
GENETIC DIVERSITY OF PSEUDOMONAS SYRINGAE pv. SYRINGAE STRAINS, CAUSING BACTERIAL STEM BLIGHT DISEASE OF ALFALFA IN THE KURDISTAN PROVINCE OF IRAN
Type
JournalPaper
Keywords
Alfalfa, phenotypic properties, Pseudomonas syringae pv. syringae, rep-PCR, syrP gene
Year
2014
Journal JOURNAL OF PLANT PATHOLOGY
DOI
Researchers Elnaz Hamedan ، Behrouz Harighi

Abstract

In 2008 and 2009, 66 isolates of Pseudomonas syringae pv. syringae were obtained from infected alfalfa leaf tissues collected from various locations of the Kurdistan province of Iran. These strains, together with the Pseudomonas syringae pv. syringae reference strain were tested for the pres- ence of the syrP gene and were also phenotypically char- acterized. According to phenotypic properties, 87% and 13% of the strains belonged to LOPAT group 1a and 1b, respectively. Genetic diversity of all strains was assessed by repetitive sequence-based polymerase chain reaction (rep-PCR) using REP (repetitive extragenic palindromic), ERIC (enterobacterial repetitive intergenic consensus) and BOX primer sets. Cluster analysis of rep-PCR revealed three groups at a similarity level of 50%. Group 1 of rep- PCR including all strains belongs to LOPAT group 1a, whereas group 2 and 3 comprise strains of LOPAT group 1a and 1b. A specific band corresponding to syrP gene was produced by 84% of the strains belonging to LOPAT group Ia. Strains belonging to LOPAT group Ib produced only non-specific bands.